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CPC 2.0
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Are you working with Human Long Noncoding RNAs? Also try the
AnnoLnc
for an integrative annotation of your lncRNAs.
CPC 2.0 beta is online now, please report to
[email protected]
for any questions or comments.
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Genome assembly version
The server detected your inputs are in GTF/BED format, please select a genome assembly version:
Genome assembly version:
Human (hg38)
Human (hg19)
Chimpanzee (panTro4)
Mouse (mm10)
Rat (rn6)
Zebrafish (danRer7)
Xenopus (xendTro3)
Fruitfly (dm6)
Try out with
ACTA1
,
HOTAIR
,
and more
Check the reverse strand too
Citations:
Kang Y. J., Yang D. C., Kong L., Hou M., Meng Y. Q., Wei L., Gao G. 2017.
CPC2: a fast and accurate coding potential calculator based on sequence intrinsic features.
Nucleic Acids Research 45(Web Server issue): W12–W16.
Kong L., Zhang Y., Ye Z. Q., Liu X. Q., Zhao S. Q., Wei L., Gao G. 2007.
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.
Nucleic Acids Research 35(Web Server issue): W345-349.
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